Unialized tracers + added a visualizer for XML traces
This commit is contained in:
rparedis
parent
325880f46e
commit
a2a6928b0a
7 changed files with 457 additions and 31 deletions
286
src/XMLplotter.py
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286
src/XMLplotter.py
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"""
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This visual DEVS plotter is based on Bill Song's DEVS Visual Modeling and Simulation Environment,
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however, it has been ported to the PythonPDEVS logic.
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See Also:
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`http://msdl.uantwerpen.be/people/bill/devsenv/summerpresentation.pdf`_
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"""
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import tkinter as tk
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from tkinter import ttk
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from tkinter import filedialog as fd
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import matplotlib.pyplot as plt
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import matplotlib.animation as animation
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from matplotlib.backends.backend_tkagg import FigureCanvasTkAgg
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import xml.etree.ElementTree as ET
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class Window:
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def __init__(self):
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self.root = tk.Tk()
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self.filename = fd.askopenfilename(parent=self.root, title="Open an XML trace file",
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initialdir="/", filetypes=[("XML files", "*.xml")])
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if not self.filename:
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self.root.quit()
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self.root.title("DEVS Plotting Environment - %s" % self.filename)
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self.frame = ttk.Frame(self.root, padding=10)
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self.frame.pack(fill=tk.BOTH, expand=True)
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self.toolbar = ttk.Frame(self.frame)
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self.toolbar.pack(side=tk.TOP, fill=tk.X)
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self.container = ttk.Frame(self.frame)
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self.container.pack(side=tk.TOP, fill=tk.BOTH, expand=True)
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self.trees = ttk.Frame(self.container)
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self.trees.pack(side=tk.LEFT, fill=tk.BOTH, expand=True)
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self.time = 0.0
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self.button_first = ttk.Button(self.toolbar, text="<<", command=self.to_first)
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self.button_first.pack(side=tk.LEFT)
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self.button_prev = ttk.Button(self.toolbar, text="<", command=self.to_prev)
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self.button_prev.pack(side=tk.LEFT)
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self.button_next = ttk.Button(self.toolbar, text=">", command=self.to_next)
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self.button_next.pack(side=tk.LEFT)
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self.button_last = ttk.Button(self.toolbar, text=">>", command=self.to_last)
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self.button_last.pack(side=tk.LEFT)
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# sep = ttk.Separator(self.toolbar)
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# sep.pack(side=tk.LEFT)
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lbl_window = ttk.Label(self.toolbar, text=" Window Size: ")
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lbl_window.pack(side=tk.LEFT)
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self.window_size = ttk.Spinbox(self.toolbar, from_=0, to=50)
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self.window_size.set(10)
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self.window_size.pack(side=tk.LEFT)
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self.mtree = ttk.Treeview(self.trees, selectmode="browse", columns=["path"], displaycolumns=[])
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self.mtree.heading('#0', text="Select a Model:", anchor=tk.W)
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self.mtree.pack(side=tk.TOP, fill=tk.BOTH, expand=True)
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self.mtree.bind("<<TreeviewSelect>>", self.select_in_mtree)
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self.stree = ttk.Treeview(self.trees, selectmode="browse", columns=["path"], displaycolumns=[])
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self.stree.heading('#0', text="Plottable Attributes:", anchor=tk.W)
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self.stree.pack(side=tk.BOTTOM, fill=tk.BOTH, expand=True)
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self.stree.pack_forget()
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self.stree.bind("<<TreeviewSelect>>", self.select_in_stree)
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# load in the model
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self.trace = {}
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self.parse_trace_file()
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self._build_model_mtree()
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self.figure = plt.figure(dpi=100)
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# self.figure.tight_layout()
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self.axis = self.figure.add_subplot(111)
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self.axis.set_xlabel("time")
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self.axis.set_ylim((0, 1))
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self.canvas = FigureCanvasTkAgg(self.figure, master=self.container)
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self.canvas.draw()
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self.canvas.get_tk_widget().pack(side=tk.LEFT, fill=tk.BOTH, expand=True)
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self.__cursor, = self.axis.plot([0, 0], [0, 0], '--', c='b', alpha=0.7)
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self.__line, = self.axis.plot([], [], c='r')
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self.__dots, = self.axis.plot([], [], 'o', c='g')
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self.__ani = animation.FuncAnimation(self.figure, lambda _: self.update(), interval=100)
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self.active_model = ""
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self.active_state = ""
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self.output = tk.Text(self.frame, height=7)
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self.output.pack(side=tk.BOTTOM, fill=tk.X, expand=True)
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self.output.pack_forget()
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self.root.mainloop()
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def to_first(self):
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if self.active_model != "" and self.active_state != "":
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self.time = 0
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def to_prev(self):
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if self.active_model != "" and self.active_state != "":
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for ev in reversed(self.trace[self.active_model]):
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if ev["time"] < self.time:
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self.time = ev["time"]
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break
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def to_next(self):
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if self.active_model != "" and self.active_state != "":
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for ev in self.trace[self.active_model]:
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if ev["time"] > self.time:
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self.time = ev["time"]
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break
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def to_last(self):
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if self.active_model != "" and self.active_state != "":
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self.time = self.trace[self.active_model][-1]["time"]
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def get_window(self):
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return int(self.window_size.get())
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def parse_trace_file(self):
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tree = ET.parse(self.filename)
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root = tree.getroot()
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for item in root.findall('event'):
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model = item.find("model").text
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data = {}
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data["time"] = float(item.find("time").text)
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data["kind"] = item.find("kind").text
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data["state"] = self._parse_attributes(item.find("state"))
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if data["kind"] == "IN":
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port = item.find("port")
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data["port"] = {
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"name": port.get("name"),
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"category": port.get("category"), # I or O (in or out)
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"message": port.find("message").text
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}
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self.trace.setdefault(model, []).append(data)
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def _parse_attributes(self, node):
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res = {}
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for attr in node.findall('attribute'):
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name = attr.find("name").text
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valueN = attr.find("value")
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if len(valueN.findall("attribute")) > 0:
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res[name] = self._parse_attributes(valueN)
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else:
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res[name] = valueN.text
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return res
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def _build_model_mtree(self):
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ix = 0
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tree_ids = {}
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for model in self.trace:
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lst = model.split(".")
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for mix in range(len(lst)):
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parent = ".".join(lst[:mix])
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path = ".".join(lst[:mix + 1])
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if path not in tree_ids:
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self.mtree.insert(tree_ids.get(parent, ''), tk.END, ix, text=lst[mix], open=True, values=[path])
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tree_ids[path] = ix
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ix += 1
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def _build_model_stree(self, model):
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self.stree.pack(side=tk.BOTTOM, fill=tk.BOTH, expand=True)
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if len(self.stree.get_children()) > 0:
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self.stree.delete(self.stree.get_children())
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event_list = self.trace[model]
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state = {}
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for evt in event_list:
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state.update(evt["state"])
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self._build_stree(state)
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def _build_stree(self, state, pid='', parent=""):
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uid = pid
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if pid == '':
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uid = 0
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uid += 1
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for s, v in state.items():
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path = s
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if parent != "":
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path = parent + "." + path
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self.stree.insert(pid, tk.END, uid, text=s, open=True, values=[path])
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if isinstance(v, dict):
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self._build_stree(v, uid, path)
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uid += len(v)
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else:
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uid += 1
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def update(self):
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if self.active_model != "" and self.active_state != "":
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self.create_plot_for_active_model_state()
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self.output.pack(side=tk.BOTTOM, fill=tk.BOTH, expand=True)
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self.output.delete("1.0", tk.END)
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tam = self.trace[self.active_model]
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for ix, ev in enumerate(tam):
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if ev["time"] == self.time:
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state = ev["state"]
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for p in self.active_state.split("."):
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state = state[p]
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self.output.insert(tk.END, "TIME: %.4f\nSTATE: %s\n" % (self.time, str(state)))
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if ev["kind"] == "IN":
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self.output.insert(tk.END, 'Internal Transition:\n Port: %s\n Output: %s\n Time Next: %.4f' %
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(ev["port"]["name"], ev["port"]["message"], tam[ix + 1]["time"] if ix + 1 < len(tam) else "N/A"))
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else:
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self.output.insert(tk.END, 'External Transition')
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break
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else:
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self.clear_plot()
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def select_in_mtree(self, event):
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tree = event.widget
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selection = [tree.item(item)["values"][0] for item in tree.selection() if len(tree.get_children(item)) == 0]
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if len(selection) == 1:
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self.active_model = selection[0]
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self._build_model_stree(self.active_model)
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else:
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self.active_model = ""
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self.stree.pack_forget()
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self.active_state = ""
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def select_in_stree(self, event):
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tree = event.widget
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selection = [tree.item(item)["values"][0] for item in tree.selection() if len(tree.get_children(item)) == 0]
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if len(selection) == 1:
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self.active_state = selection[0]
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def clear_plot(self):
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self.__line.set_data([], [])
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self.__dots.set_data([], [])
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self.axis.set_title("")
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self.axis.set_xlim((0, 1))
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self.axis.set_ylim((-0.5, 0.5))
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self.axis.set_yticks([])
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self.axis.set_yticklabels([])
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def create_plot_for_active_model_state(self):
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event_list = self.trace[self.active_model]
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path = self.active_state.split(".")
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in_times = []
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in_evts = []
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states = []
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for ev in event_list:
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state = ev["state"]
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for p in path:
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state = state[p]
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states.append(state)
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if ev["kind"] == "IN":
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in_times.append(ev["time"])
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in_evts.append(state)
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state_sets = list(sorted(set(states)))
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times = [x["time"] for x in event_list]
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values = [state_sets.index(x) for x in states]
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ts, vs = [], []
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for time in times:
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ts.append(time)
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ts.append(time)
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for val in values:
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vs.append(val)
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vs.append(val)
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ts.pop(0)
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vs.pop()
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self.axis.set_title("%s: %s" % (self.active_model, self.active_state))
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mid = self.time
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ws = self.get_window()
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lower = max(times[0], mid - ws/2)
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upper = lower + ws
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self.axis.set_xlim((lower, upper))
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self.axis.set_ylim((-0.5, len(state_sets) - 0.5))
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self.axis.set_yticks(range(len(state_sets)))
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self.axis.set_yticklabels(state_sets)
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self.__cursor.set_data([mid, mid], [-0.5, len(state_sets) - 0.5])
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self.__line.set_data(ts, vs)
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self.__dots.set_data(in_times, [state_sets.index(x) for x in in_evts])
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if __name__ == '__main__':
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Window()
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@ -33,13 +33,15 @@ class Tracers(object):
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:param server: the server object to be able to make remote calls
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:param recover: whether or not this is a recovered registration (used during checkpointing)
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"""
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loc = {}
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try:
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exec("from pypdevs.tracers.%s import %s" % tracer[0:2])
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exec("from pypdevs.tracers.%s import %s" % (tracer[0], tracer[1]), {}, loc)
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except:
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exec("from %s import %s" % tracer[0:2])
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self.tracers.append(eval("%s(%i, server, *%s)" % (tracer[1],
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self.uid,
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tracer[2])))
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exec("from %s import %s" % (tracer[0], tracer[1]), {}, loc)
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self.tracers.append(loc[tracer[1]](self.uid, server, *tracer[2]))
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# self.tracers.append(eval("%s(%i, server, *%s)" % (tracer[1],
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# self.uid,
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# tracer[2])))
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self.tracers_init.append(tracer)
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self.uid += 1
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self.tracers[-1].startTracer(recover)
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96
src/pypdevs/tracers/tracerBase.py
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96
src/pypdevs/tracers/tracerBase.py
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# Copyright 2014 Modelling, Simulation and Design Lab (MSDL) at
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# McGill University and the University of Antwerp (http://msdl.cs.mcgill.ca/)
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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class BaseTracer:
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"""
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The baseclass for the tracers, allows for inheritance.
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"""
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def __init__(self, uid, server):
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"""
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Constructor
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:param uid: the UID of this tracer
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:param server: the server to make remote calls on
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"""
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self.uid = uid
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self.server = server
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def startTracer(self, recover):
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"""
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Starts up the tracer
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:param recover: whether or not this is a recovery call (so whether or not the file should be appended to)
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"""
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pass
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def stopTracer(self):
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"""
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Stop the tracer
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"""
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pass
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def trace(self, time, text):
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"""
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Actual tracing function
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:param time: time at which this trace happened
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:param text: the text that was traced
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"""
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pass
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def traceInternal(self, aDEVS):
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"""
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Tracing done for the internal transition function
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:param aDEVS: the model that transitioned
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"""
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pass
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def traceConfluent(self, aDEVS):
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"""
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Tracing done for the confluent transition function
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:param aDEVS: the model that transitioned
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"""
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pass
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def traceExternal(self, aDEVS):
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"""
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Tracing done for the external transition function
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:param aDEVS: the model that transitioned
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"""
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pass
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def traceInit(self, aDEVS, t):
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"""
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Tracing done for the initialisation
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:param aDEVS: the model that was initialised
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:param t: time at which it should be traced
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"""
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pass
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def traceUser(self, time, aDEVS, variable, value):
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"""
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Tracing done for a user change
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:param aDEVS: the model that was initialised
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:param time: time at which it should be traced
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:param variable: the variable that was changed
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:param value: the new value for the variable
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"""
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pass
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@ -13,11 +13,12 @@
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# See the License for the specific language governing permissions and
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# limitations under the License.
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from pypdevs.tracers.tracerBase import BaseTracer
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from pypdevs.util import runTraceAtController, toStr
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from pypdevs.activityVisualisation import visualizeMatrix
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import sys
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class TracerCell(object):
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class TracerCell(BaseTracer):
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"""
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A tracer for Cell-DEVS style tracing output
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"""
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@ -32,12 +33,11 @@ class TracerCell(object):
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:param y_size: the y size of the grid
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:param multifile: whether or not multiple files should be generated for each timestep
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"""
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super(TracerCell, self).__init__(uid, server)
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if server.getName() == 0:
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self.filename = filename
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else:
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self.filename = None
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self.server = server
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self.uid = uid
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self.x_size = x_size
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self.y_size = y_size
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self.multifile = multifile
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@ -13,6 +13,7 @@
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# See the License for the specific language governing permissions and
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# limitations under the License.
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from pypdevs.tracers.tracerBase import BaseTracer
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from pypdevs.util import runTraceAtController, toStr, DEVSException
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from math import floor
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@ -36,7 +37,7 @@ class VCDRecord(object):
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# Set to None to make sure that it will be changed
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self.bit_size = None
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class TracerVCD(object):
|
||||
class TracerVCD(BaseTracer):
|
||||
"""
|
||||
A tracer for VCD output. Should only be used for binary signals!
|
||||
"""
|
||||
|
|
@ -48,12 +49,11 @@ class TracerVCD(object):
|
|||
:param server: the server to make remote requests on
|
||||
:param filename: file to save the trace to
|
||||
"""
|
||||
super(TracerVCD, self).__init__(uid, server)
|
||||
if server.getName() == 0:
|
||||
self.filename = filename
|
||||
else:
|
||||
self.filename = None
|
||||
self.server = server
|
||||
self.uid = uid
|
||||
|
||||
def startTracer(self, recover):
|
||||
"""
|
||||
|
|
@ -65,9 +65,9 @@ class TracerVCD(object):
|
|||
# Nothing to do here as we aren't the controller
|
||||
return
|
||||
elif recover:
|
||||
self.vcd_file = open(self.filename, 'a+')
|
||||
self.vcd_file = open(self.filename, 'ab+')
|
||||
else:
|
||||
self.vcd_file = open(self.filename, 'w')
|
||||
self.vcd_file = open(self.filename, 'wb')
|
||||
self.vcd_var_list = []
|
||||
self.vcd_prevtime = 0.0
|
||||
self.vcdHeader()
|
||||
|
|
@ -147,16 +147,16 @@ class TracerVCD(object):
|
|||
if vcd_state[i] == 'b':
|
||||
continue
|
||||
else:
|
||||
raise DEVSException(("Port %s in model does not carry " +
|
||||
raise DEVSException(("Port %s in model %s does not carry " +
|
||||
"a binary signal\n" +
|
||||
"VCD exports require a binary signal, " +
|
||||
"not: ") % (port_name, model_name, vcd_state))
|
||||
"not: %s") % (port_name, model_name, vcd_state))
|
||||
char = vcd_state[i]
|
||||
if char not in ["0", "1", "E", "x"]:
|
||||
raise DEVSException(("Port %s in model does not carry " +
|
||||
raise DEVSException(("Port %s in model %s does not carry " +
|
||||
"a binary signal\n" +
|
||||
"VCD exports require a binary signal, " +
|
||||
"not: ") % (port_name, model_name, vcd_state))
|
||||
"not: %s") % (port_name, model_name, vcd_state))
|
||||
# Find the identifier of this wire
|
||||
for i in range(len(self.vcd_var_list)):
|
||||
if (self.vcd_var_list[i].model_name == model_name and
|
||||
|
|
|
|||
|
|
@ -13,10 +13,11 @@
|
|||
# See the License for the specific language governing permissions and
|
||||
# limitations under the License.
|
||||
|
||||
from pypdevs.tracers.tracerBase import BaseTracer
|
||||
from pypdevs.util import runTraceAtController
|
||||
import sys
|
||||
|
||||
class TracerVerbose(object):
|
||||
class TracerVerbose(BaseTracer):
|
||||
"""
|
||||
A tracer for simple verbose output
|
||||
"""
|
||||
|
|
@ -28,13 +29,12 @@ class TracerVerbose(object):
|
|||
:param server: the server to make remote calls on
|
||||
:param filename: file to save the trace to, can be None for output to stdout
|
||||
"""
|
||||
super(TracerVerbose, self).__init__(uid, server)
|
||||
if server.getName() == 0:
|
||||
self.filename = filename
|
||||
else:
|
||||
self.filename = None
|
||||
self.server = server
|
||||
self.prevtime = (-1, -1)
|
||||
self.uid = uid
|
||||
|
||||
def startTracer(self, recover):
|
||||
"""
|
||||
|
|
|
|||
|
|
@ -13,10 +13,11 @@
|
|||
# See the License for the specific language governing permissions and
|
||||
# limitations under the License.
|
||||
|
||||
from pypdevs.tracers.tracerBase import BaseTracer
|
||||
from pypdevs.util import runTraceAtController, toStr
|
||||
import sys
|
||||
import sys, re
|
||||
|
||||
class TracerXML(object):
|
||||
class TracerXML(BaseTracer):
|
||||
"""
|
||||
A tracer for XML tracing output
|
||||
"""
|
||||
|
|
@ -28,12 +29,11 @@ class TracerXML(object):
|
|||
:param server: the server to make remote calls on
|
||||
:param filename: file to save the trace to
|
||||
"""
|
||||
super(TracerXML, self).__init__(uid, server)
|
||||
if server.getName() == 0:
|
||||
self.filename = filename
|
||||
else:
|
||||
self.filename = None
|
||||
self.server = server
|
||||
self.uid = uid
|
||||
|
||||
def write_py23(self, string):
|
||||
try:
|
||||
|
|
@ -103,7 +103,7 @@ class TracerXML(object):
|
|||
aDEVS.time_last,
|
||||
"'IN'",
|
||||
toStr(port_info),
|
||||
toStr(aDEVS.state.toXML()),
|
||||
toStr(TracerXML.toXML(aDEVS.state)),
|
||||
toStr(aDEVS.state)])
|
||||
|
||||
def traceExternal(self, aDEVS):
|
||||
|
|
@ -125,7 +125,7 @@ class TracerXML(object):
|
|||
aDEVS.time_last,
|
||||
"'EX'",
|
||||
toStr(port_info),
|
||||
toStr(aDEVS.state.toXML()),
|
||||
toStr(TracerXML.toXML(aDEVS.state)),
|
||||
toStr(aDEVS.state)])
|
||||
|
||||
def traceConfluent(self, aDEVS):
|
||||
|
|
@ -147,7 +147,7 @@ class TracerXML(object):
|
|||
aDEVS.time_last,
|
||||
"'EX'",
|
||||
toStr(port_info),
|
||||
toStr(aDEVS.state.toXML()),
|
||||
toStr(TracerXML.toXML(aDEVS.state)),
|
||||
toStr(aDEVS.state)])
|
||||
port_info = ""
|
||||
for I in range(len(aDEVS.OPorts)):
|
||||
|
|
@ -163,7 +163,7 @@ class TracerXML(object):
|
|||
aDEVS.time_last,
|
||||
"'IN'",
|
||||
toStr(port_info),
|
||||
toStr(aDEVS.state.toXML()),
|
||||
toStr(TracerXML.toXML(aDEVS.state)),
|
||||
toStr(aDEVS.state)])
|
||||
|
||||
def traceInit(self, aDEVS, t):
|
||||
|
|
@ -180,5 +180,47 @@ class TracerXML(object):
|
|||
t,
|
||||
"'EX'",
|
||||
"''",
|
||||
toStr(aDEVS.state.toXML()),
|
||||
toStr(TracerXML.toXML(aDEVS.state)),
|
||||
toStr(aDEVS.state)])
|
||||
|
||||
@staticmethod
|
||||
def toXML(state):
|
||||
primitives = {
|
||||
int: "Integer",
|
||||
float: "Float",
|
||||
str: "String"
|
||||
}
|
||||
|
||||
def create_multi_attrib(name, elem):
|
||||
cat = "C"
|
||||
if type(elem) in primitives:
|
||||
cat = "P"
|
||||
type_ = primitives[type(elem)]
|
||||
return "<attribute category=\"%s\"><name>%s</name><type>%s</type><value>%s</value></attribute>" % (
|
||||
cat, name, type_, str(elem))
|
||||
else:
|
||||
type_ = "Unknown"
|
||||
value = TracerXML.toXML(elem)
|
||||
return "<attribute category=\"%s\"><name>%s</name><type>%s</type><value>%s</value></attribute>" % (
|
||||
cat, name, type_, str(value))
|
||||
|
||||
if isinstance(state, (str, int, float)):
|
||||
return "<attribute category=\"P\"><name>state</name><type>%s</type><value>%s</value></attribute>" % (primitives[type(state)], str(state))
|
||||
elif isinstance(state, dict):
|
||||
res = ""
|
||||
for k, v in state.items():
|
||||
name = re.sub("[^a-zA-Z0-9_]", "", k)
|
||||
res += create_multi_attrib(name, v)
|
||||
return "<attribute category=\"C\"><name>state</name><type>Map</type><value>%s</value></attribute>" % res
|
||||
elif isinstance(state, (list, tuple)):
|
||||
res = ""
|
||||
for ix, item in enumerate(state):
|
||||
name = "item-%d" % ix
|
||||
res += create_multi_attrib(name, item)
|
||||
return "<attribute category=\"C\"><name>state</name><type>List</type><value>%s</value></attribute>" % res
|
||||
elif hasattr(state, "toXML"):
|
||||
return state.toXML()
|
||||
elif hasattr(state, "__str__"):
|
||||
return TracerXML.toXML(str(state))
|
||||
return TracerXML.toXML({k: getattr(state, k) for k in dir(state) if not k.startswith("_") and not callable(getattr(state, k))})
|
||||
|
||||
|
|
|
|||
Loading…
Add table
Add a link
Reference in a new issue